Pre-2013 Publications

Engineering ecosystems and synthetic ecologies
Mee M, Wang HH
Mol BioSys 8:2470-2483, (2012) [pdf]

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Genome-scale promoter engineering by co-selection MAGE
Wang HH*, Kim HB*, Cong L, Jeong JH, Bang D, Church GM 
Nature Methods 9: 591-593 (2012) [pdf]

Multipliexed in vivo tagging of enzyme ensembles with MAGE for in vitro single-pot multi-enzyme catalysis
Wang HH*, Huang P*, Xu G, Marbelstone A, Li J, Forster T, Jewett MC, Church GM.
ACS Synth Biol 1:43-52 (2012) [pdf]

Enhanced multiplex genome engineering through cooperative oligonucleotide co-selection 
Carr PA*, Wang HH*, Sterling B*, Isaacs FJ, Xu G, Kraal L, Bang D, Jacobson J, Church GM
Nucleic Acids Res doi: 10.1093/nar/gks455 (2012) [pdf]

Improving lambda red genome engineering via rational removal of endogenous nucleases
Mosberg JA, Gregg CJ, Lajoie MJ, Wang HH, Church GM. Mosberg JA, Gregg CJ, Lajoie MJ, Wang HH, Church GM
PLoS One 7(9): e44638. doi:10.1371/journal.pone.0044638 (2012) [pdf]

Multiplexed genome engineering and genotyping methods applications for synthetic biology and metabolic engineering
Wang HH, Church GM
Methods Enzymol 498:409-26 (2011) [pdf]

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Precise manipulation of chromosomes in vivo enables genome-wide codon replacement 
Isaacs FJ*, Carr PA*, Wang HH*, Lajoie MJ, Sterling B, Kraal L, Tolonen AC, Gianoulis TA, Goodman DB, Reppas NB, Emig CJ, Bang D, Hwang SJ, Jewett MC, Jacobson JM, Church GM
Science 333: 348-53 (2011) [pdf]

Modified bases enable high-efficiency oligonucleotide-mediated allelic replacement via mismatch repair evasion 
Wang HH, Xu G, Vonner AJ, Church G
Nucleic Acids Res 39(16): 7336-47 (2011) [pdf]

Synthetic Genomes for Synthetic Biology 
Wang HH
J Mol Cell Biol 2(4): 178-179 (2010) [pdf]

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Programming cells by multiplex genome engineering and accelerated evolution 
Wang HH*, Isaacs FJ*, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM
Nature 460:894-8 (2009) [pdf]

Physiological noise in MR images: an indicator of the tissue response to ischemia? 
Wang HH, Menezes NM, Zhu MW, Ay H, Koroshetz WJ, Aronen HJ, Karonen JO, Liu Y, Nuutinen J, Wald LL, Sorensen AG
J Magn Reson Imaging 27(4): 866-71 (2008) [pdf]

Analytical methods of atherosclerosis research 
Wang HH, Wang XF 
Current Development in Atherosclerosis Research, 33-66, Nova Science Publishing, NY (2006).

Modeling atherosclerosis 
Wang HH, Wang XF
Trends in Atherosclerosis Research, 279-311, Nova Science Publishing, NY, (2004).

Analytical models of atherosclerosis
Wang HH 
Atherosclerosis 159: 1-7 (2001) [pdf]